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IDSCO3014 TypeCDS
From5376782 nt length1143
To5377924 aa length380
Gene pI4.83
Definitionputative translation initiation factor M.W (Da)39135
NoteSCE33.16c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5062 putative initiation factor eIF-2B alpha subunit5261.0e-150
sgrSGR_4522 putative methylthioribose-1-phosphate isomerase5231.0e-149
samSAM23877_3052 Methylthioribose-1-phosphate isomerase6510.0e+00
scabSCAB55271 putative initiation factor eIF-2B alpha subunit6092.0e-175
saceSACE_3608 methylthioribose-1-phosphate isomerase981.0e-21
nfarnfa45440 putative initiation factor eIF-2B alpha subunit homolog1923.0e-50

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IF-2B1Initiation factor 2 subunit family87-361205.39.8e-61

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028716.1 MULTISPECIES: S-methyl-5-thioribose-1-phosphate isomerase [S... 15590.0e+00
WP_003975798.1 MULTISPECIES: S-methyl-5-thioribose-1-phosphate isomerase [S... 15510.0e+00
WP_030865583.1 MULTISPECIES: S-methyl-5-thioribose-1-phosphate isomerase [S... 15500.0e+00
WP_109032601.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces ru... 15380.0e+00
WP_115742436.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sp... 15380.0e+00
WP_121701245.1 MULTISPECIES: S-methyl-5-thioribose-1-phosphate isomerase [u... 15070.0e+00
WP_061444391.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sp... 15060.0e+00
WP_087809018.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sp... 15050.0e+00
WP_164457990.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces te... 15050.0e+00
WP_189742591.1 S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces te... 15040.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear