-- | --

IDSCO3046 TypeCDS
From5330831 nt length1470
To5329362 aa length489
Gene pI4.67
Definitionconserved hypothetical protein M.W (Da)52623
NoteSCE34.27 SCBAC19G2.01 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5032 putative transcriptional regulator6340.0e+00
sgrSGR_4492 putative transcriptional regulator6570.0e+00
samSAM23877_3088 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr8750.0e+00
scabSCAB54981 putative transcriptional regulator6910.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytR_cpsA_psr1Cell envelope-related transcriptional attenuator domain87-247135.31.7e-39

LytR_C1LytR cell envelope-related transcriptional attenuator357-44952.66.2e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAD55462.1 conserved hypothetical protein [Streptomyces coelicolor A3(2)] 23200.0e+00
WP_030873058.1 MULTISPECIES: LCP family protein [Streptomyces] >gb 23160.0e+00
WP_093456293.1 MULTISPECIES: LCP family protein [unclassified Streptomyces]... 23150.0e+00
WP_210984772.1 LCP family protein [Streptomyces sp. RK76] >lcl 23150.0e+00
WP_121717575.1 LCP family protein [Streptomyces sp. E5N91] 23150.0e+00
WP_136207600.1 LCP family protein [Streptomyces sp. LRa12] >lcl 23130.0e+00
WP_191849768.1 LCP family protein [Streptomyces anthocyanicus] >dbj 23110.0e+00
WP_189284298.1 LCP family protein [Streptomyces anthocyanicus] >dbj 23100.0e+00
WP_193486662.1 LCP family protein [Streptomyces anthocyanicus] >dbj 23090.0e+00
EFD68848.1 transcriptional regulator [Streptomyces lividans TK24] 23080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear