-- | --

IDSCO3075 TypeCDS
From5298144 nt length870
To5299013 aa length289
Gene pI6.31
Definitionputative transcriptional regulator M.W (Da)30249
NoteSCE25.16c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3503 putative transcriptional regulator4245.0e-120
sgrSGR_4456 putative RpiR-family transcriptional regulator4401.0e-124
samSAM23877_3127 putative transcriptional regulator5120.0e+00
scabSCAB54621 putative transcriptional regulator4875.0e-139
saceSACE_4847 transcriptional regulator, RpiR family1878.0e-49

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_61Helix-turn-helix domain, rpiR family26-8644.78.6e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028753.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 13650.0e+00
WP_121716000.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 13600.0e+00
WP_093456301.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [un... 13600.0e+00
WP_109034607.1 MurR/RpiR family transcriptional regulator [Streptomyces rub... 13600.0e+00
WP_030870427.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 13570.0e+00
WP_003975736.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 13560.0e+00
WP_136207592.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 13500.0e+00
WP_087808968.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 13400.0e+00
WP_102930540.1 MurR/RpiR family transcriptional regulator [Streptomyces dia... 13350.0e+00
WP_164246547.1 MurR/RpiR family transcriptional regulator [Streptomyces coe... 13340.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear