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IDSCO3192 TypeCDS
From5170127 nt length1323
To5168805 aa length440
Gene pI7.74
Definitionputative integral membrane protein M.W (Da)47022
NoteSCE22.09 AseI frg.E
SignalP v.4.0Signal peptide | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3683 hypothetical protein5255.0e-150
sgrSGR_2430 conserved hypothetical protein1926.0e-50
samSAM23877_3241 putative integral membrane protein6490.0e+00
scabSCAB53021 hypothetical protein4185.0e-118
saceSACE_1900 low temperature requirement A2926.0e-80

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LtrA1Bacterial low temperature requirement A protein (LtrA)66-419318.94e-95

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU42715.1 low temperature requirement protein A [Streptomyces sp. SID7813] ... 17720.0e+00
17700.0e+00
AXL89146.1 hypothetical protein C4J65_13145 [Streptomyces sp. CB09001] 17010.0e+00
WP_161270498.1 MULTISPECIES: low temperature requirement protein A [Strepto... 16840.0e+00
WP_193783008.1 low temperature requirement protein A [Streptomyces sp. E5N9... 16810.0e+00
EFD68708.1 low temperature requirement protein LtrA [Streptomyces lividans T... 16810.0e+00
WP_016326457.1 MULTISPECIES: low temperature requirement protein A [Strepto... 16790.0e+00
AIJ15282.2 low temperature requirement protein LtrA [Streptomyces lividans T... 16790.0e+00
WP_109035022.1 low temperature requirement protein A [Streptomyces rubrogri... 16790.0e+00
WP_030873365.1 MULTISPECIES: low temperature requirement protein A [Strepto... 16780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear