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IDSCO3328 TypeCDS
From4987240 nt length213
To4987452 aa length70
Gene pI9.05
Definitionhypothetical protein M.W (Da)7798
NoteSCE68.26c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4731 hypothetical protein1182.0e-28
sgrSGR_4146 conserved hypothetical protein1295.0e-32
samSAM23877_4231 DNA-binding protein1396.0e-46
scabSCAB39161 hypothetical protein1403.0e-35

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_171Helix-turn-helix domain14-6252.63.3e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_004984898.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3538.9e-43
OSP35376.1 transcriptional regulator [Streptomyces sp. 13-12-16] >dbj 3549.1e-43
KFG02535.1 transcriptional regulator [Streptomyces scabiei] >gb 3531.3e-42
AJE41859.1 transcriptional regulator [Streptomyces nodosus] >gb 3531.3e-42
AGS71012.1 DNA-binding protein [Streptomyces collinus Tu 365] >gb 3531.4e-42
QFZ74974.1 helix-turn-helix domain-containing protein [Streptomyces fagopyri... 3531.4e-42
ELP66686.1 DNA binding domain protein, excisionase family [Streptomyces turg... 3531.7e-42
EFF92373.1 excisionase/Xis, DNA-binding protein [Streptomyces sp. e14] 3521.8e-42
WP_157842153.1 MULTISPECIES: helix-turn-helix domain-containing protein [Ac... 3511.8e-42
WP_121791081.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3511.8e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear