-- | --

IDSCO3373 TypeCDS
From4928552 nt length2526
To4931077 aa length841
Gene pI5.84
Definitionputative Clp-family ATP-binding protease M.W (Da)93015
NoteSCE94.24c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4697 putative ATP-dependent Clp protease15260.0e+00
sgrSGR_4118 putative ATP-dependent Clp protease16150.0e+00
samSAM23877_4191 ATP-dependent Clp protease ATP-binding subunit ClpC116590.0e+00
scabSCAB39491 putative ATP-dependent Clp protease16550.0e+00
saceSACE_0414 putative ATP-dependent Clp protease13110.0e+00
nfarnfa4150 putative Clp protease12880.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)541-712191.88.7e-57

Clp_N2Clp amino terminal domain, pathogenicity island component16-68, 93-142126.72.3e-37

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein719-79892.01.7e-26

AAA2ATPase family associated with various cellular activities (AAA)209-329, 546-66482.33.7e-23

AAA_51AAA domain (dynein-related subfamily)545-66668.26.2e-19

Sigma54_activat1Sigma-54 interaction domain543-66336.04.9e-09

TniB1Bacterial TniB protein192-34534.61e-08

UVR1UvrB/uvrC motif421-45330.41.9e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975461.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40950.0e+00
WP_007452285.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40930.0e+00
WP_109029460.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40810.0e+00
MYS72653.1 AAA domain-containing protein [Streptomyces sp. SID5926] 40790.0e+00
WP_059302169.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40780.0e+00
WP_153178602.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40720.0e+00
WP_073726728.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 40710.0e+00
WP_087807976.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40690.0e+00
WP_115742736.1 ATP-dependent Clp protease ATP-binding subunit [Streptomyces... 40670.0e+00
WP_127893381.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 40660.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear