-- | --

IDSCO3414 TypeCDS
From4887277 nt length447
To4887723 aa length148
Gene pI7.51
Definitionputative transcriptional regulator M.W (Da)15940
NoteSCE9.21c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB43831 putative MarR-family transcriptional regulator1009.0e-23

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MarR1MarR family33-8942.63.8e-11

MarR_21MarR family31-8937.02.2e-09

HTH_271Winged helix DNA-binding domain45-9828.41.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975419.1 MULTISPECIES: MarR family winged helix-turn-helix transcript... 7454.1e-100
NEB11795.1 winged helix-turn-helix transcriptional regulator [Streptomyces c... 7308.0e-98
MYS68860.1 MarR family transcriptional regulator [Streptomyces sp. SID5926] 7116.3e-95
WP_164420450.1 MarR family winged helix-turn-helix transcriptional regulato... 7012.4e-93
WP_125629580.1 MULTISPECIES: MarR family winged helix-turn-helix transcript... 7002.9e-93
WP_212730793.1 MarR family transcriptional regulator [Streptomyces sp. V17-... 6942.6e-92
WP_102928993.1 MarR family winged helix-turn-helix transcriptional regulato... 6942.6e-92
WP_202493285.1 MULTISPECIES: MarR family winged helix-turn-helix transcript... 6881.3e-91
WP_203722358.1 MarR family winged helix-turn-helix transcriptional regulato... 6732.9e-89
WP_189739491.1 MarR family winged helix-turn-helix transcriptional regulato... 6587.6e-87

PSORT result

LocalizationCertaintyPSORT said
Not Clear