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IDSCO3550 TypeCDS
From4742806 nt length2448
To4740359 aa length815
Gene pI6.42
Definitionputative helicase M.W (Da)87692
NoteSCH5.13 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4613 putative ATP-dependent RNA helicase13840.0e+00
sgrSGR_3308 putative ATP-dependent RNA helicase13300.0e+00
samSAM23877_4116 putative helicase13790.0e+00
scabSCAB40871 putative ATP-dependent RNA helicase14770.0e+00
saceSACE_0373 DEAD/DEAH box helicase-like7900.0e+00
nfarnfa3650 putative ATP-dependent RNA helicase7540.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase93-26888.44.2e-25

DUF19981Domain of unknown function (DUF1998)698-77772.63.2e-20

Helicase_C1Helicase conserved C-terminal domain326-43753.72.1e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43072.1 DEAD/DEAH box helicase [Streptomyces sp. SID7813] >emb 37910.0e+00
WP_030867812.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 37860.0e+00
37850.0e+00
WP_193485160.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] 37820.0e+00
WP_168715209.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 37820.0e+00
WP_189283121.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] 37820.0e+00
WP_038534735.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] 37810.0e+00
WP_162495183.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] 37810.0e+00
WP_189739565.1 DEAD/DEAH box helicase [Streptomyces tendae] 37760.0e+00
OWA08102.1 DEAD/DEAH box helicase [Streptomyces sp. CS113] 37750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear