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IDSCO3661 TypeCDS
From4624461 nt length2598
To4627058 aa length865
GeneclpB pI4.67
DefinitionclpB putative ATP-dependent protease ATP-binding subunit M.W (Da)94407
NoteSCH44.01c SCH10.39c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4514 putative ATP-dependent Clp protease12980.0e+00
sgrSGR_3426 putative ATP-dependent protease subunit14760.0e+00
samSAM23877_3960 protein disaggregation chaperone15900.0e+00
scabSCAB42291 putative ATP-dependent Clp protease15110.0e+00
saceSACE_7199 putative Clp protease ATP-binding subunit10240.0e+00
nfarnfa54020 putative Clp protease ATP-binding subunit9910.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)600-761184.31.8e-54

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein768-84897.24e-28

AAA2ATPase family associated with various cellular activities (AAA)204-338, 606-72480.41.4e-22

Clp_N2Clp amino terminal domain, pathogenicity island component19-68, 95-14664.37.3e-18

AAA_51AAA domain (dynein-related subfamily)605-72363.81.5e-17

Sigma54_activat1Sigma-54 interaction domain603-70537.71.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_121713940.1 ATP-dependent chaperone ClpB [Streptomyces sp. E5N91] 36750.0e+00
WP_106518250.1 ATP-dependent chaperone ClpB [Streptomyces sp. 111WW2] >gb 36750.0e+00
WP_003975278.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] >s... 36750.0e+00
WP_202493337.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] 36740.0e+00
WP_191849040.1 ATP-dependent chaperone ClpB [Streptomyces anthocyanicus] >d... 36730.0e+00
WP_109029326.1 ATP-dependent chaperone ClpB [Streptomyces rubrogriseus] 36610.0e+00
NEC39148.1 ATP-dependent chaperone ClpB [Streptomyces rubrogriseus] 36570.0e+00
WP_115742880.1 ATP-dependent chaperone ClpB [Streptomyces sp. CB09001] >gb 36530.0e+00
WP_127892855.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] >g... 36500.0e+00
WP_087808178.1 ATP-dependent chaperone ClpB [Streptomyces sp. CS113] >gb 36400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear