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IDSCO3714 TypeCDS
From4577000 nt length1224
To4578223 aa length407
Gene pI11.35
Definitionputative transposase M.W (Da)44724
NoteSCH35.10 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_47 putative IS605 family IS1136A-like transposase2634.0e-71
sgrSGR_4025 putative transposase2227.0e-59
scabSCAB34131 putative transposase7150.0e+00
saceSACE_1925 putative transposase5162.0e-147
nfarnfa15170 putative transposase3901.0e-109

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OrfB_IS6051Probable transposase184-28893.01.3e-26

OrfB_Zn_ribbon1Putative transposase DNA-binding domain301-36978.42.5e-22

HTH_OrfB_IS6051Helix-turn-helix domain1-4443.61.4e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029184.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [S... 20800.0e+00
WP_121717198.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 19970.0e+00
WP_134654984.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 19340.0e+00
TYP16944.1 putati... 19270.0e+00
WP_007388432.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [S... 19210.0e+00
WP_165684486.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 19100.0e+00
WP_223771806.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 18890.0e+00
WP_125629982.1 MULTISPECIES: RNA-guided endonuclease TnpB family protein [u... 18730.0e+00
WP_217163296.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 18690.0e+00
WP_134653599.1 RNA-guided endonuclease TnpB family protein [Streptomyces sp... 18680.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear