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IDSCO3731 TypeCDS
From4562168 nt length204
To4561965 aa length67
GenescoF1 pI4.54
DefinitionscoF1 cold-shock protein M.W (Da)7189
NoteSCH22A.09 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_3914 cold shock protein-like protein1386.0e-46

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66101.91.1e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EOY48691.1 Cold shock protein CspG [Streptomyces lividans 1326] 3503.1e-42
WP_003975209.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3484.2e-42
WP_030401482.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3469.6e-42
WP_189416541.1 MULTISPECIES: cold-shock protein [Streptomyces] >dbj 3441.9e-41
WP_055418803.1 cold-shock protein [Streptomyces pactum] >gb 3442.0e-41
WP_226028221.1 cold-shock protein [Streptomyces hyderabadensis] 3432.6e-41
WP_121748142.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3415.1e-41
WP_077796268.1 cold-shock protein [Streptomyces sp. JHA26] 3372.4e-40
WP_215168069.1 cold shock domain-containing protein [Streptomyces sp. ISL-1... 3354.2e-40
WP_217143812.1 cold shock domain-containing protein [Streptomyces sp. AC627... 3345.4e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear