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IDSCO3748 TypeCDS
From4548348 nt length204
To4548551 aa length67
Genef40 pI4.82
Definitionf40 cold shock protein M.W (Da)7189
NoteSCH22A.26c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4447 putative cold shock protein1121.0e-26
sgrSGR_5495 putative cold shock protein1298.0e-32
samSAM23877_3897 cold shock protein-like protein1372.0e-45
scabSCAB43471 putative cold shock protein1266.0e-31

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65105.67.9e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_087808264.1 cold-shock protein [Streptomyces sp. CS113] >gb 3469.7e-42
WP_003975194.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3451.1e-41
WP_189869453.1 cold-shock protein [Streptomyces viridiviolaceus] >dbj 3423.3e-41
WP_121748131.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3414.8e-41
WP_067029156.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.4e-40
WP_217143806.1 cold shock domain-containing protein [Streptomyces sp. AC627... 3381.5e-40
GHD64728.1 cold-shock protein [Streptomyces goshikiensis] 3371.9e-40
WP_030228921.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3372.2e-40
WP_007268031.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3354.2e-40
WP_077060780.1 cold-shock protein [Streptomyces sp. MP131-18] >gb 3354.8e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear