-- | --

IDSCO3782 TypeCDS
From4507579 nt length1350
To4508928 aa length449
Gene pI5.26
Definitionputative regulatory protein M.W (Da)48105
NoteSCH63.29c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4421 putative regulatory protein5293.0e-151
samSAM23877_3878 Regulatory protein7530.0e+00
scabSCAB44651 putative regulatory protein6380.0e+00

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain9-6644.91e-11

TPR_162Tetratricopeptide repeat94-147, 266-31137.62.5e-09

HTH_191Helix-turn-helix domain11-7036.14.6e-09

HTH_31Helix-turn-helix15-6731.89.7e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202492496.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13540.0e+00
WP_003975159.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13530.0e+00
WP_203695946.1 helix-turn-helix domain-containing protein [Streptomyces rub... 13520.0e+00
WP_109029239.1 helix-turn-helix domain-containing protein [Streptomyces rub... 13510.0e+00
WP_189283185.1 helix-turn-helix domain-containing protein [Streptomyces ant... 13480.0e+00
WP_121700859.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13223.2e-178
WP_030180572.1 helix-turn-helix domain-containing protein [Streptomyces vio... 13223.7e-178
WP_087808296.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13181.3e-177
WP_127896907.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13181.5e-177
WP_159325016.1 helix-turn-helix domain-containing protein [Streptomyces ten... 13172.0e-177

PSORT result

LocalizationCertaintyPSORT said
Not Clear