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IDSCO3874 TypeCDS
From4402070 nt length2061
To4404130 aa length686
GenegyrB pI5.07
DefinitiongyrB DNA gyrase subunit B M.W (Da)75433
NoteSCH18.11c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4321 putative DNA gyrase subunit B12090.0e+00
sgrSGR_3705 DNA gyrase subunit B12160.0e+00
samSAM23877_3784 DNA gyrase subunit B13310.0e+00
scabSCAB45761 putative DNA gyrase subunit B12590.0e+00
saceSACE_0008 DNA gyrase subunit B7830.0e+00
nfarnfa60 putative DNA gyrase B subunit8450.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B265-437211.26.8e-63

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus617-67586.59.2e-25

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase60-19970.12e-19

Toprim1Toprim domain466-57764.11e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029285.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 31860.0e+00
T10969 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) chain B - Streptom... 31820.0e+00
EFD68139.1 DNA gyrase, B subunit [Streptomyces lividans TK24] >gb 31820.0e+00
WP_174854974.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces ... 31810.0e+00
WP_202493385.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 31810.0e+00
NEC36607.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces rubro... 31760.0e+00
WP_203696909.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces ... 31730.0e+00
MYS78145.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces sp. S... 31730.0e+00
WP_206303099.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 31620.0e+00
WP_205351023.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces ... 31610.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear