-- | --

IDSCO3907 TypeCDS
From4363895 nt length600
To4363296 aa length199
Genessb pI5
Definitionputative single-strand binding protein M.W (Da)19906
NoteSCH24.29 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4288 putative single-stranded DNA-binding protein2248.0e-60
sgrSGR_3673 putative single-stranded DNA-binding protein2485.0e-67
samSAM23877_3749 Single-stranded DNA-binding protein 22603.0e-90
scabSCAB46111 putative single-stranded DNA-binding protein2531.0e-68
saceSACE_7350 single-strand DNA-binding protein1583.0e-40
nfarnfa55730 putative single-strand binding protein1761.0e-45

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SSB1Single-strand binding protein family7-107104.72e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217163161.1 single-stranded DNA-binding protein [Streptomyces sp. AC512_... 6384.7e-82
WP_111663072.1 MULTISPECIES: single-stranded DNA-binding protein [unclassif... 6375.7e-82
GHE44561.1 hypothetical protein GCM10018782_18800 [Streptomyces griseoauran... 6366.7e-82
WP_115743110.1 single-stranded DNA-binding protein [Streptomyces sp. CB0900... 6367.6e-82
WP_006141323.1 MULTISPECIES: single-stranded DNA-binding protein [Streptomy... 6367.9e-82
WP_030376957.1 MULTISPECIES: single-stranded DNA-binding protein [unclassif... 6369.0e-82
WP_064728794.1 single-stranded DNA-binding protein [Streptomyces parvulus] ... 6351.0e-81
WP_133889990.1 single-stranded DNA-binding protein [Streptomyces sp. BK208]... 6351.1e-81
WP_202234798.1 single-stranded DNA-binding protein [Streptomyces sp. SN-593... 6351.1e-81
WP_087808400.1 single-stranded DNA-binding protein [Streptomyces sp. CS113]... 6351.2e-81

PSORT result

LocalizationCertaintyPSORT said
Not Clear