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IDSCO3925 TypeCDS
From4348860 nt length726
To4348135 aa length241
Gene pI8.1
Definitionputative transcriptional regulator M.W (Da)26884
NoteSCQ11.08 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4268 putative IclR-family transcriptional regulator3653.0e-102
sgrSGR_3656 putative IclR-family transcriptional regulator2977.0e-82
samSAM23877_3730 Transcriptional regulator4464.0e-161
scabSCAB46301 putative IclR-family transcriptional regulator3992.0e-112

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator126-21356.81.8e-15

HTH_IclR1IclR helix-turn-helix domain2-5049.72.1e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EOY48894.1 Transcriptional regulator, IclR family [Streptomyces lividans 132... 11802.6e-163
EFD68087.1 transcriptional regulator [Streptomyces lividans TK24] 11761.3e-162
AIJ14681.2 transcriptional regulator [Streptomyces lividans TK24] >gb 11773.5e-162
NEC33084.1 helix-turn-helix domain-containing protein [Streptomyces rubrogri... 11663.0e-161
WP_167469301.1 helix-turn-helix domain-containing protein [Streptomyces rub... 11621.6e-160
WP_115743124.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11611.8e-160
WP_193783336.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11612.4e-160
WP_030863517.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 11602.7e-160
WP_189283288.1 helix-turn-helix domain-containing protein [Streptomyces ant... 11551.4e-159
WP_153181864.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 11394.2e-157

PSORT result

LocalizationCertaintyPSORT said
Not Clear