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IDSCO3928 TypeCDS
From4345752 nt length1839
To4343914 aa length612
GenethiC pI4.86
Definitionputative thiamine biosynthesis protein M.W (Da)67372
NoteSCQ11.11 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4265 putative thiamine biosynthesis protein11030.0e+00
sgrSGR_3653 putative thiamine biosynthesis protein11350.0e+00
samSAM23877_3726 thiamin (pyrimidine moiety) biosynthesis protein11250.0e+00
scabSCAB46341 putative thiamine biosynthesis protein11220.0e+00
saceSACE_0511 putative thiamine biosynthesis protein7710.0e+00
nfarnfa53160 putative thiamine biosynthesis protein7600.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ThiC_Rad_SAM1Radical SAM ThiC family149-569659.12.2e-198

ThiC-associated1ThiC-associated domain39-10277.35.2e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029315.1 MULTISPECIES: phosphomethylpyrimidine synthase ThiC [Strepto... 29840.0e+00
AZM76761.1 phosphomethylpyrimidine synthase ThiC [Streptomyces sp. KPB2] 29410.0e+00
WP_165286783.1 phosphomethylpyrimidine synthase ThiC [Streptomyces sp. SID1... 29400.0e+00
WP_030189016.1 phosphomethylpyrimidine synthase ThiC [Streptomyces violaceo... 29380.0e+00
PSK59086.1 Phosphomethylpyrimidine synthase [Streptomyces sp. 111WW2] 29270.0e+00
GHA33657.1 phosphomethylpyrimidine synthase [Streptomyces anthocyanicus] 29260.0e+00
GHC02572.1 phosphomethylpyrimidine synthase [Streptomyces anthocyanicus] 29230.0e+00
AIJ14678.1 Phosphomethylpyrimidine synthase [Streptomyces lividans TK24] >gb... 29220.0e+00
NEB14355.1 phosphomethylpyrimidine synthase ThiC [Streptomyces coelicoflavus... 29190.0e+00
WP_173943911.1 MULTISPECIES: phosphomethylpyrimidine synthase ThiC [Strepto... 29180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear