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IDSCO3961 TypeCDS
From4305683 nt length1278
To4306960 aa length425
GeneserS pI5.28
Definitionseryl-tRNA synthase M.W (Da)46966
NoteSCD78.28c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4244 putative seryl-tRNA synthetase7110.0e+00
sgrSGR_3630 putative seryl-tRNA synthase7070.0e+00
samSAM23877_3704 Serine--tRNA ligase8460.0e+00
scabSCAB46561 putative seryl-tRNA synthetase7640.0e+00
saceSACE_0158 seryl-tRNA synthetase4771.0e-135
nfarnfa1400 putative seryl-tRNA synthase4715.0e-134

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_2b1tRNA synthetase class II core domain (G, H, P, S and T)222-397103.41.2e-29

Seryl_tRNA_N1Seryl-tRNA synthetase N-terminal domain1-10691.14.4e-26

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974982.1 MULTISPECIES: serine--tRNA ligase [Streptomyces] >sp 20070.0e+00
WP_127892773.1 serine--tRNA ligase [Streptomyces sp. S10(2018)] 20070.0e+00
WP_109029110.1 serine--tRNA ligase [Streptomyces rubrogriseus] >gb 20040.0e+00
WP_210912997.1 MULTISPECIES: serine--tRNA ligase [unclassified Streptomyces... 20020.0e+00
WP_133889951.1 serine--tRNA ligase [Streptomyces sp. BK208] 20020.0e+00
NEV89203.1 serine--tRNA ligase [Streptomyces tendae] 20010.0e+00
WP_087808436.1 serine--tRNA ligase [Streptomyces sp. CS113] >gb 19980.0e+00
WP_159324893.1 serine--tRNA ligase [Streptomyces tendae] 19890.0e+00
WP_226024942.1 serine--tRNA ligase [Streptomyces hyderabadensis] 19880.0e+00
WP_037799070.1 MULTISPECIES: serine--tRNA ligase [Streptomyces] 19880.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear