ID	SCO4005	Type	CDS
From	4269609	nt length	474
To	4269136	aa length	157
Gene		pI	9.07
Definition	putative RNA polymerase sigma factor	M.W (Da)	17757
Note	2SC10A7.09	AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	95-147	65.1	3e-18
	Sigma70_r4	1	Sigma-70, region 4	100-149	52.1	3.1e-14
	Sigma70_r2	1	Sigma-70 region 2	4-66	34.8	9.2e-09
	Sigma70_ECF	1	ECF sigma factor	50-139	22.9	5.8e-05

BLAST search result (top 10 hits)

ID	Description	Score	E-value
MZE43512.1	SigE family RNA polymerase sigma factor [Streptomyces sp. SID5477...	814	3.1e-110
WP_162495205.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	817	3.5e-110
WP_030863607.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	817	3.8e-110
MYU43528.1	SigE family RNA polymerase sigma factor [Streptomyces sp. SID7813...	813	3.8e-110
WP_164245287.1	SigE family RNA polymerase sigma factor [Streptomyces coelic...	817	6.2e-110
WP_164384073.1	MULTISPECIES: SigE family RNA polymerase sigma factor [uncla...	816	8.2e-110
MYS74572.1	SigE family RNA polymerase sigma factor [Streptomyces sp. SID5926...	810	1.0e-109
KPC70057.1	hypothetical protein ADL35_39810 [Streptomyces sp. NRRL WC-3753]	812	1.1e-109
WP_007451408.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	815	1.1e-109
WP_164278955.1	SigE family RNA polymerase sigma factor [Streptomyces rubrog...	814	1.2e-109

PSORT result

Localization	Certainty	PSORT said
Not Clear

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