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IDSCO4074 TypeCDS
From4198742 nt length816
To4199557 aa length271
Gene pI10.34
Definitionputative integral membrane protein M.W (Da)28324
NoteSCD25.10c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4143 putative ABC transporter permease protein2593.0e-70
sgrSGR_3865 putative ABC transporter permease protein2341.0e-62
samSAM23877_3605 Integral membrane protein3849.0e-137
scabSCAB47761 putative ABC transporter permease protein3116.0e-86

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter27-23273.31.6e-20

ABC2_membrane_31ABC-2 family transporter protein78-25847.21.5e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974898.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8201.3e-107
WP_121711726.1 ABC transporter permease [Streptomyces sp. E5N91] 8192.0e-107
WP_093456593.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8159.3e-107
WP_115743235.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 8071.2e-105
WP_164278789.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 8061.7e-105
WP_109029038.1 ABC transporter permease [Streptomyces rubrogriseus] 8052.3e-105
WP_106518125.1 ABC transporter permease [Streptomyces sp. 111WW2] >gb 7983.0e-104
WP_186777825.1 ABC transporter permease [Streptomyces sp. SS06011] 7574.9e-98
WP_164420120.1 ABC transporter permease [Streptomyces coelicoflavus] 7515.0e-97
WP_159330489.1 ABC transporter permease [Streptomyces tendae] 7436.2e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear