ID	SCO4146	Type	CDS
From	4104377	nt length	543
To	4103835	aa length	180
Gene		pI	10.93
Definition	putative ECF subfamily sigma factor	M.W (Da)	20053
Note	SCD84.13	AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	26-92	54.3	7.9e-15
	Sigma70_r4_2	1	Sigma-70, region 4	125-175	48.7	4.1e-13
	Sigma70_r4	1	Sigma-70, region 4	128-177	35.9	3.5e-09
	Sigma70_ECF	1	ECF sigma factor	23-179	21.6	0.00015

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_087808562.1	RNA polymerase sigma factor [Streptomyces sp. CS113] >gb	602	3.2e-77
WP_159328951.1	RNA polymerase sigma factor [Streptomyces tendae]	601	3.6e-77
WP_030868497.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >lc...	601	3.6e-77
WP_011029464.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	601	4.1e-77
WP_127895416.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	600	4.7e-77
WP_030403618.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	600	5.7e-77
WP_217140938.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	598	1.1e-76
MZE73613.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID...	597	1.6e-76
WP_087790419.1	MULTISPECIES: RNA polymerase sigma factor [unclassified Stre...	597	1.8e-76
WP_109035069.1	RNA polymerase sigma factor [Streptomyces rubrogriseus] >gb	596	2.1e-76

PSORT result

Localization	Certainty	PSORT said
Not Clear

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