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IDSCO4206 TypeCDS
From4051539 nt length816
To4052354 aa length271
Gene pI10.23
Definitionputative AraC-family transcriptional regulator M.W (Da)29783
Note2SCD46.20c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4003 putative AraC-family transcriptional regulator3671.0e-102
sgrSGR_4584 putative AraC-family transcriptional regulator3385.0e-94
samSAM23877_3490 putative AraC-family transcriptional regulator4743.0e-172
scabSCAB_NO3 putative AraC-family transcriptional regulator3777.0e-106
saceSACE_4718 AraC-family transcriptional regulator2886.0e-79

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AraC_binding1AraC-like ligand binding domain21-14377.76.6e-22

HTH_181Helix-turn-helix domain190-26667.96.4e-19

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family235-26541.87.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029500.1 MULTISPECIES: AraC family transcriptional regulator [Strepto... 10864.8e-148
WP_136207969.1 AraC family transcriptional regulator [Streptomyces sp. LRa1... 10841.0e-147
WP_093456626.1 MULTISPECIES: AraC family transcriptional regulator [Strepto... 10812.8e-147
WP_121715225.1 AraC family transcriptional regulator [Streptomyces sp. E5N9... 10795.5e-147
WP_016326819.1 MULTISPECIES: AraC family transcriptional regulator [Strepto... 10789.4e-147
EFD67844.1 AraC family transcription regulator [Streptomyces lividans TK24] 10771.4e-146
MYS75734.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 10734.8e-146
WP_109035158.1 AraC family transcriptional regulator [Streptomyces rubrogri... 10657.1e-145
WP_087808619.1 AraC family transcriptional regulator [Streptomyces sp. CS11... 10451.0e-141
WP_164459879.1 AraC family transcriptional regulator [Streptomyces tendae] ... 10441.3e-141

PSORT result

LocalizationCertaintyPSORT said
Not Clear