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IDSCO4232 TypeCDS
From4030764 nt length483
To4030282 aa length160
Gene pI5.39
Definitionputative transcriptional factor regulator M.W (Da)17829
NoteSCD8A.05 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3970 putative CarD-like transcriptional regulator2851.0e-78
sgrSGR_4011 putative CarD-like transcriptional regulator3207.0e-89
samSAM23877_3468 RNA polymerase-binding transcription factor CarD3207.0e-115
scabSCAB50081 putative CarD-like transcriptional regulator3207.0e-89
saceSACE_0438 CarD family transcriptional regulator2514.0e-68
nfarnfa4350 putative transcriptional regulator2504.0e-68

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CarD_CdnL_TRCF1CarD-like/TRCF domain3-11058.29.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003953493.1 MULTISPECIES: CarD family transcriptional regulator [Actinom... 8195.3e-111
WP_030906640.1 CarD family transcriptional regulator [Streptomyces sp. NRRL... 8161.3e-110
WP_128432156.1 CarD family transcriptional regulator [Streptomyces cyaneus] 8161.6e-110
WP_030419515.1 MULTISPECIES: CarD family transcriptional regulator [unclass... 8161.6e-110
WP_120722213.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8161.8e-110
WP_007825257.1 CarD family transcriptional regulator [Streptomyces sp. Tu60... 8152.0e-110
WP_222975880.1 CarD family transcriptional regulator [Streptomyces sp. PTM0... 8152.1e-110
WP_010472787.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8152.1e-110
WP_200304059.1 CarD family transcriptional regulator [Streptomyces adelaide... 8152.2e-110
WP_006380568.1 MULTISPECIES: CarD family transcriptional regulator [Strepto... 8152.4e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear