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IDSCO4236 TypeCDS
From4026653 nt length945
To4025709 aa length314
Gene pI10.51
Definitionputative tRNA/rRNA methyltransferase M.W (Da)32967
NoteSCD8A.09 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3966 putative tRNA/rRNA methyltransferase4601.0e-130
sgrSGR_4020 putative tRNA/rRNA methyltransferase4953.0e-141
samSAM23877_3464 putative tRNA/rRNA methyltransferase5930.0e+00
scabSCAB50121 putative tRNA/rRNA methyltransferase5422.0e-155
saceSACE_0444 tRNA/rRNA methyltransferase2978.0e-82
nfarnfa4390 putative tRNA/rRNA methyltransferase2854.0e-78

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family166-307115.51.9e-33

SpoU_sub_bind1RNA 2'-O ribose methyltransferase substrate binding72-14971.64.3e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029524.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13690.0e+00
WP_003974739.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13640.0e+00
WP_191851155.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 13610.0e+00
WP_054101643.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13500.0e+00
WP_076975486.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 13490.0e+00
WP_189750186.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 13460.0e+00
WP_164139699.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 13450.0e+00
WP_104635482.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13450.0e+00
WP_153179203.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13450.0e+00
WP_114531982.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 13450.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear