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IDSCO4360 TypeCDS
From3893383 nt length843
To3892541 aa length280
Gene pI8.69
Definitionputative ABC transport system integral membrane protein M.W (Da)30188
NoteSCD19.15 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3117 putative ABC transporter permease protein3622.0e-101
samSAM23877_3360 ABC transport system integral membrane protein5040.0e+00
nfarnfa22850 putative ABC transporter4006.0e-113

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter32-235101.73.2e-29

ABC2_membrane_31ABC-2 family transporter protein76-26650.51.5e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029603.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 14210.0e+00
WP_030867178.1 ABC transporter permease [Streptomyces violaceoruber] 14160.0e+00
WP_189284267.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 14140.0e+00
WP_121710897.1 ABC transporter permease [Streptomyces sp. E5N91] 14130.0e+00
WP_093456669.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 14130.0e+00
WP_003974621.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 14110.0e+00
WP_164270496.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 13940.0e+00
MYS70954.1 ABC transporter permease [Streptomyces sp. SID5926] 13900.0e+00
WP_109035380.1 ABC transporter permease [Streptomyces rubrogriseus] 13890.0e+00
WP_159328731.1 ABC transporter permease [Streptomyces tendae] 13700.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear