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IDSCO4390 TypeCDS
From3860570 nt length1404
To3859167 aa length467
Gene pI4.92
Definitionhypothetical protein M.W (Da)49291
NoteSCD10.22 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3857 hypothetical protein6560.0e+00
sgrSGR_3074 conserved hypothetical protein6252.0e-180
samSAM23877_3338 hypothetical protein8250.0e+00
scabSCAB51371 hypothetical protein7110.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PAS_42PAS fold33-142, 157-27276.12.1e-21

PAS1PAS fold29-13870.41.1e-19

PAS_92PAS domain44-137, 163-23539.06.8e-10

PAS_81PAS domain29-7031.11.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43910.1 PAS domain-containing protein [Streptomyces sp. SID7813] >gb 20160.0e+00
WP_037667316.1 MULTISPECIES: PAS domain-containing protein [Streptomyces] >... 20120.0e+00
WP_051815090.1 MULTISPECIES: PAS domain-containing protein [Streptomyces] >... 20100.0e+00
AIJ14273.1 hypothetical protein SLIV_16480 [Streptomyces lividans TK24] >gb 20090.0e+00
WP_193783255.1 PAS domain-containing protein [Streptomyces sp. E5N91] 20080.0e+00
AXL93372.1 diguanylate cyclase [Streptomyces sp. CB09001] 20080.0e+00
WP_162833246.1 PAS domain-containing protein [Streptomyces sp. CB09001] 20070.0e+00
EFD67671.1 conserved hypothetical protein [Streptomyces lividans TK24] 20070.0e+00
WP_189284273.1 PAS domain-containing protein [Streptomyces anthocyanicus] >... 20050.0e+00
WP_174855215.1 PAS domain-containing protein [Streptomyces rubrogriseus] 20020.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear