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IDSCO4426 TypeCDS
From3821740 nt length2982
To3824721 aa length993
GeneafsR pI5.23
DefinitionafsR regulatory protein M.W (Da)105716
NoteSCD6.04c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3804 putative transcriptional regulator11340.0e+00
sgrSGR_3012 transcriptional regulator11650.0e+00
samSAM23877_3308 Regulatory protein AfsR15510.0e+00
scabSCAB51941 putative transcriptional regulator13420.0e+00
saceSACE_0488 transcriptional regulator, SARP family3374.0e-93
nfarnfa53810 putative transcriptional regulator1444.0e-35

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BTAD1Bacterial transcriptional activator domain119-263153.16.1e-45

TPR_122Tetratricopeptide repeat783-853, 868-93258.84.5e-16

NB-ARC1NB-ARC domain325-54650.01.8e-13

TPR_102Tetratricopeptide repeat823-856, 947-97438.28e-10

Trans_reg_C1Transcriptional regulatory protein, C terminal45-9935.85.7e-09

TPR_81Tetratricopeptide repeat944-97530.81.7e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029645.1 MULTISPECIES: transcriptional regulator AfsR [Streptomyces] ... 43120.0e+00
BAA14186.1 afsR [Streptomyces coelicolor] 42990.0e+00
WP_106517066.1 MULTISPECIES: transcriptional regulator AfsR [Streptomyces] ... 42270.0e+00
WP_030867263.1 transcriptional regulator AfsR [Streptomyces violaceoruber] 42240.0e+00
WP_003974556.1 MULTISPECIES: transcriptional regulator AfsR [Streptomyces] ... 42210.0e+00
ACJ04045.1 AfsR [Streptomyces lividans] 42110.0e+00
WP_121713500.1 transcriptional regulator AfsR [Streptomyces sp. E5N91] 41960.0e+00
WP_121702784.1 MULTISPECIES: transcriptional regulator AfsR [unclassified S... 41500.0e+00
WP_076974858.1 transcriptional regulator AfsR [Streptomyces sp. M1013] >gb 41440.0e+00
WP_059301354.1 transcriptional regulator AfsR [Streptomyces canus] 41270.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear