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IDSCO4676 TypeCDS
From3559379 nt length873
To3560251 aa length290
Gene pI11.56
Definitionhypothetical protein M.W (Da)31404
NoteSCD40A.22c SCD31.01c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3139 hypothetical protein2256.0e-60
sgrSGR_4331 conserved hypothetical protein1111.0e-25
samSAM23877_3862 hypothetical protein3012.0e-103
scabSCAB44871 hypothetical protein3262.0e-90

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029807.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12797.5e-177
WP_003974287.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12711.5e-175
WP_191850387.1 helix-turn-helix domain-containing protein [Streptomyces ant... 12701.7e-175
WP_136207492.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12632.5e-174
MYS72703.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 11773.1e-161
WP_189737758.1 helix-turn-helix domain-containing protein [Streptomyces ten... 11642.8e-159
WP_164458938.1 helix-turn-helix domain-containing protein [Streptomyces ten... 11582.2e-158
WP_210914863.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 11341.2e-154
WP_161380671.1 helix-turn-helix domain-containing protein, partial [Strepto... 11286.1e-154
WP_093456793.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10662.4e-144

PSORT result

LocalizationCertaintyPSORT said
Not Clear