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IDSCO4680 TypeCDS
From3556707 nt length891
To3557597 aa length296
Gene pI9.34
Definitionputative DNA binding protein M.W (Da)32485
NoteSCD31.05c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4493 DNA-binding protein4658.0e-168

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain5-8459.33.1e-16

HTH_31Helix-turn-helix34-8029.45.5e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029811.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13840.0e+00
WP_173943947.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13790.0e+00
WP_037897585.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13770.0e+00
GHA58252.1 DNA-binding protein [Streptomyces anthocyanicus] 13730.0e+00
WP_003974283.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13710.0e+00
WP_093456795.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13680.0e+00
AIJ13968.2 DNA-binding protein [Streptomyces lividans TK24] >gb 13670.0e+00
PSK56347.1 hypothetical protein B0E38_02649 [Streptomyces sp. 111WW2] 13640.0e+00
REH22926.1 helix-turn-helix protein [Streptomyces sp. 2221.1] >emb 13630.0e+00
MZG13975.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 13610.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear