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IDSCO4684 TypeCDS
From3553760 nt length204
To3553557 aa length67
GenescoF3 pI4.54
DefinitionscoF3 cold shock protein M.W (Da)7162
NoteSCD31.09 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB87581 putative cold shock protein1342.0e-33

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65101.41.6e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974279.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3432.6e-41
WP_121745217.1 cold-shock protein [Streptomyces sp. E2N166] 3407.6e-41
WP_106517709.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3391.1e-40
WP_076972349.1 cold-shock protein [Streptomyces sp. M1013] >gb 3381.2e-40
WP_030039020.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.2e-40
WP_018540241.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3381.6e-40
WP_030817331.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.6e-40
WP_031045667.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3371.9e-40
WP_073934532.1 cold-shock protein [Streptomyces sp. CB02400] >gb 3362.5e-40
WP_100044809.1 cold-shock protein [Streptomyces sp. Alain-F2R5] >gb 3353.4e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear