-- | --

IDSCO4717 TypeCDS
From3532328 nt length540
To3531789 aa length179
GenerplF pI10.5
Definition50S ribosomal protein L6 M.W (Da)19179
NoteSCD31.42 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4941 putative ribosomal protein L63012.0e-83
sgrSGR_2819 50S ribosomal protein L63277.0e-91
samSAM23877_4513 50S ribosomal subunit protein L63499.0e-126
scabSCAB36791 putative ribosomal protein L63413.0e-95
saceSACE_6821 50S ribosomal protein L62339.0e-63
nfarnfa7890 putative ribosomal protein L62505.0e-68

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L62Ribosomal protein L611-83, 92-165140.42e-41

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974253.1 MULTISPECIES: 50S ribosomal protein L6 [Streptomyces] >sp 9121.3e-124
WP_194276370.1 50S ribosomal protein L6 [Streptomyces olivaceus] >lcl 9094.5e-124
WP_030145478.1 MULTISPECIES: 50S ribosomal protein L6 [Streptomyces] >gb 9095.0e-124
WP_031041545.1 MULTISPECIES: 50S ribosomal protein L6 [Streptomyces] >gb 9086.3e-124
WP_165288014.1 MULTISPECIES: 50S ribosomal protein L6 [Streptomyces] >gb 9061.3e-123
WP_121716337.1 50S ribosomal protein L6 [Streptomyces sp. E5N91] 9051.8e-123
WP_217167013.1 50S ribosomal protein L6 [Streptomyces sp. AC512_CC834] 9042.2e-123
WP_030400227.1 MULTISPECIES: 50S ribosomal protein L6 [Streptomyces] >gb 9033.6e-123
WP_216719818.1 50S ribosomal protein L6 [Streptomyces sp. A108] >lcl 9024.4e-123
WP_031034780.1 MULTISPECIES: 50S ribosomal protein L6 [unclassified Strepto... 9001.0e-122

PSORT result

LocalizationCertaintyPSORT said
Not Clear