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IDSCO4754 TypeCDS
From3502070 nt length1068
To3501003 aa length355
Gene pI7.84
Definitionputative transcriptional regulator M.W (Da)38134
NoteSC6G4.32 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4983 putative LacI-family transcriptional regulator5486.0e-157
samSAM23877_4550 Transcriptional regulator6540.0e+00
scabSCAB36381 putative LacI-family transcriptional regulator5979.0e-172

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_31Periplasmic binding protein-like domain182-344143.18.4e-42

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family75-31992.13.7e-26

LacI1Bacterial regulatory proteins, lacI family20-6350.31.4e-13

Peripla_BP_41Periplasmic binding protein domain77-29234.81.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029843.1 MULTISPECIES: LacI family DNA-binding transcriptional regula... 18020.0e+00
WP_003974218.1 MULTISPECIES: LacI family DNA-binding transcriptional regula... 17930.0e+00
WP_121709910.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17890.0e+00
WP_109034271.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17860.0e+00
WP_164278910.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17790.0e+00
WP_115743744.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17620.0e+00
WP_059300049.1 MULTISPECIES: LacI family DNA-binding transcriptional regula... 17570.0e+00
WP_030145510.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17550.0e+00
WP_121701109.1 MULTISPECIES: LacI family DNA-binding transcriptional regula... 17550.0e+00
WP_076975877.1 LacI family DNA-binding transcriptional regulator [Streptomy... 17500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear