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IDSCO4766 TypeCDS
From3489487 nt length921
To3488567 aa length306
Gene pI6.16
Definitionputative transcriptional regulator M.W (Da)32010
NoteSC6G4.44 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4996 putative LysR-family transcriptional regulator4324.0e-122
sgrSGR_2761 putative LysR-family transcriptional regulator4631.0e-131
samSAM23877_4580 putative LysR-family transcriptional regulator5280.0e+00
scabSCAB36251 putative LysR-family transcriptional regulator4861.0e-138
saceSACE_0348 probable transcriptional regulator, LysR family2433.0e-65

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain89-298140.06.1e-41

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6381.03.9e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030867589.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13610.0e+00
WP_011029852.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13610.0e+00
WP_210984253.1 LysR family transcriptional regulator [Streptomyces sp. RK76... 13570.0e+00
WP_121712890.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 13520.0e+00
WP_109034290.1 LysR family transcriptional regulator [Streptomyces rubrogri... 13430.0e+00
NEC38393.1 LysR family transcriptional regulator [Streptomyces rubrogriseus] 13420.0e+00
WP_115743755.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 13370.0e+00
AIJ13889.1 transcriptional regulator [Streptomyces lividans TK24] >gb 13150.0e+00
WP_226029738.1 LysR family transcriptional regulator [Streptomyces hyderaba... 13140.0e+00
PSK56430.1 HTH-type transcriptional regulator GltC [Streptomyces sp. 111WW2]... 13140.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear