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IDSCO4808 TypeCDS
From3432515 nt length1185
To3431331 aa length394
GenesucC pI4.5
DefinitionsucC succinyl-CoA synthetase beta chain M.W (Da)41570
NoteSCD63A.19 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3452 putative succinyl-CoA synthetase beta subunit5923.0e-170
sgrSGR_2723 putative succinyl-CoA synthetase beta chain6420.0e+00
samSAM23877_4623 succinyl-CoA synthetase%2C beta subunit7690.0e+00
scabSCAB35801 putative succinyl-CoA synthetase beta subunit6720.0e+00
saceSACE_6669 putative succinyl-CoA synthetase beta subunit4623.0e-131
nfarnfa49910 putative succinyl-CoA synthetase beta subunit4322.0e-122

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ATP-grasp_21ATP-grasp domain2-195227.11.4e-67

Ligase_CoA1CoA-ligase257-37751.49.4e-14

ATP-grasp_51ATP-grasp domain3-21132.74.3e-08

GARS_A1Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain8-9327.22.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974164.1 MULTISPECIES: ADP-forming succinate--CoA ligase subunit beta... 16460.0e+00
WP_030145559.1 MULTISPECIES: ADP-forming succinate--CoA ligase subunit beta... 16460.0e+00
WP_087807670.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16430.0e+00
WP_121709033.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16420.0e+00
WP_053135877.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16420.0e+00
WP_061442951.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16410.0e+00
WP_102928842.1 MULTISPECIES: ADP-forming succinate--CoA ligase subunit beta... 16390.0e+00
WP_019330005.1 MULTISPECIES: ADP-forming succinate--CoA ligase subunit beta... 16390.0e+00
WP_217145487.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16390.0e+00
WP_104636532.1 ADP-forming succinate--CoA ligase subunit beta [Streptomyces... 16370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear