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IDSCO4809 TypeCDS
From3431302 nt length885
To3430418 aa length294
GenesucD pI5.42
DefinitionsucD succinyl CoA synthetase alpha chain M.W (Da)30239
NoteSCD63A.20 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3451 putative succinyl-CoA synthetase alpha subunit4445.0e-126
sgrSGR_2722 putative succinyl-CoA synthetase alpha chain5375.0e-154
samSAM23877_4624 succinyl-CoA synthetase%2C NAD(P)-binding%2C alpha subunit5820.0e+00
scabSCAB35791 putative succinyl-CoA synthetase alpha subunit5301.0e-151
saceSACE_6668 succinyl-coa synthetase alpha chain3762.0e-105
nfarnfa49900 putative succinyl-CoA synthetase alpha subunit3947.0e-111

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CoA_binding1CoA binding domain6-10388.14.4e-25

Ligase_CoA1CoA-ligase158-27551.49e-14

Succ_CoA_lig1Succinyl-CoA ligase like flavodoxin domain151-29045.36.5e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974163.1 MULTISPECIES: succinate--CoA ligase subunit alpha [Streptomy... 15010.0e+00
WP_059302430.1 MULTISPECIES: succinate--CoA ligase subunit alpha [Streptomy... 14980.0e+00
WP_007444052.1 MULTISPECIES: succinate--CoA ligase subunit alpha [Streptomy... 14980.0e+00
WP_031041280.1 MULTISPECIES: succinate--CoA ligase subunit alpha [Streptomy... 14970.0e+00
WP_070388987.1 succinate--CoA ligase subunit alpha [Streptomyces olivaceus]... 14950.0e+00
WP_194276306.1 succinate--CoA ligase subunit alpha [Streptomyces olivaceus]... 14930.0e+00
WP_121748769.1 succinate--CoA ligase subunit alpha [Streptomyces sp. E2N166... 14920.0e+00
WP_030145560.1 MULTISPECIES: succinate--CoA ligase subunit alpha [Streptomy... 14920.0e+00
WP_063482880.1 succinate--CoA ligase subunit alpha [Streptomyces ambofacien... 14910.0e+00
WP_055418271.1 succinate--CoA ligase subunit alpha [Streptomyces pactum] >g... 14890.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear