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IDSCO4830 TypeCDS
From3405658 nt length1185
To3404474 aa length394
Gene pI6.7
Definitionputative glycine betaine ABC transport system ATP-binding protein M.W (Da)42133
NoteSC2A6.15 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3432 putative glycine betaine ABC transporter ATP-binding protein5292.0e-151
sgrSGR_1082 putative glycine betaine ABC transporter ATP-binding protein5454.0e-156
samSAM23877_4645 putative glycine betaine ABC transport system ATP-binding protein6090.0e+00
scabSCAB6991 putative glycine betaine ABC transporter ATP-binding protein4271.0e-120

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter64-211119.01.9e-34

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974142.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 15890.0e+00
WP_011029893.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 15820.0e+00
WP_030871962.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15770.0e+00
WP_093456839.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 15730.0e+00
WP_104634969.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15340.0e+00
WP_161379115.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15300.0e+00
WP_210914925.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 15290.0e+00
WP_127894146.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15240.0e+00
WP_164458886.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15190.0e+00
WP_109034365.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 15080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear