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IDSCO4831 TypeCDS
From3404474 nt length1947
To3402528 aa length648
Gene pI10.19
Definitionputative glycine betaine ABC transport system integral membrane protein M.W (Da)67234
NoteSC2A6.16 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3431 putative glycine betaine ABC transporter permease protein7380.0e+00
sgrSGR_1081 putative glycine betaine ABC transporer permease protein7950.0e+00
samSAM23877_4646 putative glycine betaine ABC transport system integral membrane protein9510.0e+00
scabSCAB6981 putative glycine betaine ABC transporter permease protein3051.0e-83

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component162-323, 475-637122.61.4e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029894.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 22150.0e+00
WP_030871964.1 ABC transporter permease subunit [Streptomyces violaceoruber... 22110.0e+00
WP_106518533.1 ABC transporter permease subunit [Streptomyces sp. 111WW2] >... 22060.0e+00
WP_136208737.1 ABC transporter permease subunit [Streptomyces sp. LRa12] >l... 22040.0e+00
WP_003974141.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 22020.0e+00
WP_093456840.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 22000.0e+00
WP_164383508.1 ABC transporter permease subunit [Streptomyces sp. OM5714] >... 21810.0e+00
WP_007444132.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 21670.0e+00
WP_164247927.1 ABC transporter permease subunit [Streptomyces coelicoflavus... 21620.0e+00
WP_165685029.1 ABC transporter permease subunit [Streptomyces sp. KO7888] >... 21620.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear