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IDSCO4832 TypeCDS
From3402526 nt length969
To3401558 aa length322
Gene pI6.68
Definitionputative glycine betaine-binding lipoprotein M.W (Da)35957
NoteSC2A6.17 AseI frg.D
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3430 putative glycine betaine ABC transporter solute-binding protein5192.0e-148
sgrSGR_1080 putative glycine betaine-binding lipoprotein4853.0e-138
samSAM23877_4647 putative glycine betaine-binding lipoprotein5860.0e+00
scabSCAB6971 putative glycine betaine ABC transporter substrate-binding protein3124.0e-86

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system45-311165.41.6e-48

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029895.1 MULTISPECIES: ABC transporter substrate-binding protein [Str... 16100.0e+00
WP_078653433.1 MULTISPECIES: ABC transporter substrate-binding protein [Str... 16050.0e+00
WP_003974140.1 MULTISPECIES: ABC transporter substrate-binding protein [Str... 16010.0e+00
WP_193782915.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 15670.0e+00
WP_164270654.1 ABC transporter substrate-binding protein [Streptomyces rubr... 15630.0e+00
WP_109034368.1 ABC transporter substrate-binding protein [Streptomyces rubr... 15590.0e+00
MYS69461.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 15470.0e+00
WP_162833268.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 15330.0e+00
AXL90532.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 15330.0e+00
WP_104634967.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 15260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear