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IDSCO4868 TypeCDS
From3370178 nt length846
To3371023 aa length281
Gene pI10.22
Definitionputative lipoprotein M.W (Da)30459
NoteSCK20.09c AseI frg.O
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3383 putative lipoprotein3809.0e-107
sgrSGR_2671 hypothetical protein2671.0e-72
samSAM23877_4686 putative lipoprotein4523.0e-163
scabSCAB35161 putative lipoprotein3554.0e-99

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain168-27966.43.1e-18

PG_binding_11Putative peptidoglycan binding domain82-13750.51.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029915.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 12672.5e-175
EFD67175.1 lipoprotein [Streptomyces lividans TK24] 12631.1e-174
WP_016327105.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 12621.5e-174
WP_136209473.1 L,D-transpeptidase family protein [Streptomyces sp. LRa12] >... 12595.5e-174
WP_109034426.1 L,D-transpeptidase family protein [Streptomyces rubrogriseus... 12456.3e-172
WP_164270664.1 L,D-transpeptidase family protein [Streptomyces rubrogriseus... 12388.7e-171
WP_051815169.1 L,D-transpeptidase family protein [Streptomyces violaceorube... 12232.2e-168
WP_164458866.1 L,D-transpeptidase family protein [Streptomyces tendae] >gb 12082.4e-166
WP_115743839.1 L,D-transpeptidase family protein [Streptomyces sp. CB09001]... 12092.4e-166
WP_161381055.1 MULTISPECIES: L,D-transpeptidase family protein [unclassifie... 12049.5e-166

PSORT result

LocalizationCertaintyPSORT said
Not Clear