-- | --

IDSCO5111 TypeCDS
From3112967 nt length1908
To3111060 aa length635
Gene pI4.95
Definitionputative GTP-binding protein M.W (Da)69616
NoteSCBAC31E11.07 AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3177 putative GTP-binding elongation factor11380.0e+00
sgrSGR_2419 putative GTP-binding elongation factor11110.0e+00
samSAM23877_4889 GTP-binding protein TypA/BipA-like protein12490.0e+00
scabSCAB31551 putative GTP-binding elongation factor12020.0e+00
saceSACE_1005 GTP-binding elongation factor family protein7830.0e+00
nfarnfa47590 putative GTP-binding elongation factor7710.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GTP_EFTU1Elongation factor Tu GTP binding domain6-211174.61.5e-51

EFG_C1Elongation factor G C-terminus425-50471.92.9e-20

GTP_EFTU_D21Elongation factor Tu domain 2235-30546.63e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973866.1 MULTISPECIES: translational GTPase TypA [Streptomyces] >gb 32950.0e+00
WP_007444485.1 MULTISPECIES: translational GTPase TypA [Streptomyces] >gb 32820.0e+00
WP_159324187.1 translational GTPase TypA [Streptomyces tendae] 32790.0e+00
WP_054099124.1 MULTISPECIES: translational GTPase TypA [Streptomyces] >gb 32780.0e+00
WP_153178119.1 MULTISPECIES: translational GTPase TypA [unclassified Strept... 32780.0e+00
WP_109033258.1 translational GTPase TypA [Streptomyces rubrogriseus] >gb 32770.0e+00
WP_059300750.1 MULTISPECIES: translational GTPase TypA [Streptomyces] >lcl 32770.0e+00
WP_164244431.1 translational GTPase TypA [Streptomyces coelicoflavus] >gb 32740.0e+00
WP_104634246.1 translational GTPase TypA [Streptomyces sp. MH60] >gb 32730.0e+00
WP_189738656.1 translational GTPase TypA [Streptomyces tendae] >dbj 32700.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear