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IDSCO5118 TypeCDS
From3102028 nt length924
To3101105 aa length307
Gene pI9.59
Definitionputative peptide transport system integral membrane protein M.W (Da)33501
NoteSC9E12.03 AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3148 putative peptide ABC transporter permease protein4914.0e-140
sgrSGR_2412 putative peptide ABC transporter permease protein5123.0e-146
samSAM23877_4902 putative peptide transport system integral membrane protein5500.0e+00
scabSCAB31421 putative peptide ABC transporter permease protein5247.0e-150
saceSACE_0845 putative peptide ABC transporter, permease component3054.0e-84
nfarnfa1690 putative ABC transporter permease1416.0e-35

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component112-306133.37.4e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973859.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13340.0e+00
WP_087789635.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13320.0e+00
MYS71832.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 13300.0e+00
WP_121715012.1 ABC transporter permease [Streptomyces sp. E5N91] 13290.0e+00
WP_061442707.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 13290.0e+00
WP_109033265.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 13290.0e+00
KPC89157.1 ABC transporter permease [Streptomyces sp. NRRL WC-3753] 13220.0e+00
WP_164414778.1 MULTISPECIES: ABC transporter permease [Streptomyces] 13210.0e+00
WP_164383348.1 ABC transporter permease [Streptomyces sp. OM5714] >lcl 13190.0e+00
WP_115744037.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 13180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear