-- | --

IDSCO5166 TypeCDS
From3052569 nt length2640
To3055208 aa length879
Gene pI10.2
Definitionputative helicase M.W (Da)92468
NoteSCP8.29c AseI frg.Q
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3098 putative ATP-dependent RNA helicase5942.0e-170
sgrSGR_2359 putative ATP-dependent RNA helicase7650.0e+00
samSAM23877_4947 putative helicase8420.0e+00
saceSACE_1060 putative ATP-dependent RNA helicase4472.0e-126
nfarnfa45730 putative ATP-dependent RNA helicase3381.0e-93

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase2-169163.82.9e-48

Helicase_C1Helicase conserved C-terminal domain212-321102.31.6e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030093.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 19310.0e+00
WP_093456955.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 19300.0e+00
REH23413.1 superfamily II DNA/RNA helicase [Streptomyces sp. 2221.1] >emb 19290.0e+00
AIJ13501.1 helicase [Streptomyces lividans TK24] >gb 19290.0e+00
GGL45723.1 helicase [Streptomyces anthocyanicus] 19270.0e+00
WP_038534403.1 DEAD/DEAH box helicase [Streptomyces lividans] 19270.0e+00
WP_189283863.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] 19260.0e+00
WP_134112036.1 DEAD/DEAH box helicase, partial [Streptomyces coelicolor] 19250.0e+00
WP_187438399.1 DEAD/DEAH box helicase, partial [Streptomyces coelicolor] 19250.0e+00
WP_187439089.1 DEAD/DEAH box helicase, partial [Streptomyces coelicolor] 19240.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear