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IDSCO5309 TypeCDS
From2886254 nt length1098
To2885157 aa length365
Gene pI9.74
Definitionhypothetical protein M.W (Da)38903
NoteSC6G9.24c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2945 putative Ku70/Ku80 protein3986.0e-112
sgrSGR_2195 putative Ku70/Ku80 protein4393.0e-124
samSAM23877_5082 Non-homologous end joining protein Ku5600.0e+00
scabSCAB29491 putative Ku70/Ku80 protein4646.0e-132
saceSACE_3709 DNA binding protein, Ku-like2026.0e-53
nfarnfa34910 hypothetical protein1732.0e-44

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ku1Ku70/Ku80 beta-barrel domain14-179110.01.1e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GGL46826.1 non-homologous end joining protein Ku [Streptomyces anthocyanicu... 12453.2e-169
MYU44831.1 Ku protein [Streptomyces sp. SID7813] >gb 12444.3e-169
GHC18073.1 non-homologous end joining protein Ku [Streptomyces anthocyanicu... 12428.5e-169
GHA41720.1 non-homologous end joining protein Ku [Streptomyces anthocyanicu... 12411.5e-168
WP_202493648.1 MULTISPECIES: Ku protein [Streptomyces] 12369.4e-168
WP_189283899.1 Ku protein [Streptomyces anthocyanicus] 12236.1e-166
WP_003973662.1 MULTISPECIES: Ku protein [Streptomyces] >gb 12229.5e-166
WP_030872665.1 MULTISPECIES: Ku protein [Streptomyces] 12211.7e-165
WP_191849291.1 Ku protein [Streptomyces anthocyanicus] 12183.4e-165
MYS75131.1 Ku protein [Streptomyces sp. SID5926] 12178.8e-165

PSORT result

LocalizationCertaintyPSORT said
Not Clear