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IDSCO5353 TypeCDS
From2846846 nt length1392
To2845455 aa length463
GenelysA pI5.01
DefinitionlysA diaminopimelate decarboxylase M.W (Da)49762
NoteSCBAC5H2.22 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2919 putative diaminopimelate decarboxylase7980.0e+00
sgrSGR_2183 putative diaminopimelate decarboxylase8270.0e+00
samSAM23877_5097 Diaminopimelate decarboxylase8890.0e+00
scabSCAB28971 putative diaminopimelate decarboxylase8480.0e+00
saceSACE_6299 diaminopimelate decarboxylase5431.0e-155
nfarnfa10480 putative diaminopimelate decarboxylase4646.0e-132

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain71-323212.65.5e-63

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain326-43855.54.9e-15

Ala_racemase_N1Alanine racemase, N-terminal domain121-26223.04.9e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030202.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22940.0e+00
WP_106517744.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22920.0e+00
WP_193486282.1 diaminopimelate decarboxylase [Streptomyces anthocyanicus] >... 22910.0e+00
WP_003973644.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22830.0e+00
WP_093457002.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 22780.0e+00
WP_109033437.1 diaminopimelate decarboxylase [Streptomyces rubrogriseus] 22710.0e+00
WP_121715516.1 diaminopimelate decarboxylase [Streptomyces sp. E5N91] 22700.0e+00
WP_164278420.1 diaminopimelate decarboxylase [Streptomyces rubrogriseus] >g... 22690.0e+00
MYS69882.1 diaminopimelate decarboxylase [Streptomyces sp. SID5926] 22640.0e+00
WP_115744223.1 diaminopimelate decarboxylase [Streptomyces sp. CB09001] >gb... 22490.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear