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IDSCO5405 TypeCDS
From2789624 nt length477
To2790100 aa length158
Gene pI6.72
Definitionputative transcriptional regulator M.W (Da)18313
NoteSC8F4.09c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2853 putative MarR-family transcriptional regulator2522.0e-68
sgrSGR_2133 putative MarR-family transcriptional regulator2752.0e-75
samSAM23877_5152 Transcriptional regulator3099.0e-111
scabSCAB28421 putative MarR-family transcriptional regulator2852.0e-78
saceSACE_0209 transcriptional regulator, MarR family1306.0e-32

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MarR_21MarR family40-10042.92.9e-11

MarR1MarR family41-9939.43.8e-10

HTH_271Winged helix DNA-binding domain41-10927.62.7e-06

HTH_51Bacterial regulatory protein, arsR family47-9022.95.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973592.1 MULTISPECIES: MarR family transcriptional regulator [Strepto... 8325.1e-113
3ZMDA Crystal structure of AbsC, a MarR family transcriptional regulator fr... 8328.4e-113
WP_087807185.1 MULTISPECIES: MarR family transcriptional regulator [Strepto... 8309.0e-113
WP_087789510.1 MarR family transcriptional regulator [Streptomyces sp. CS15... 8309.3e-113
WP_076976372.1 MULTISPECIES: MarR family transcriptional regulator [unclass... 8264.3e-112
WP_109033473.1 MarR family transcriptional regulator [Streptomyces rubrogri... 8264.5e-112
WP_073724102.1 MarR family transcriptional regulator [Streptomyces sp. CB02... 8231.1e-111
WP_031040577.1 MarR family transcriptional regulator [Streptomyces sp. NRRL... 8221.9e-111
WP_030402699.1 MULTISPECIES: MarR family transcriptional regulator [Strepto... 8202.9e-111
WP_226025116.1 MarR family transcriptional regulator [Streptomyces hyderaba... 8195.1e-111

PSORT result

LocalizationCertaintyPSORT said
Not Clear