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IDSCO5416 TypeCDS
From2781009 nt length1014
To2782022 aa length337
Gene pI9.53
Definitionputative transcriptional regulator M.W (Da)36209
NoteSC8F4.20c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7454 putative AraC-family transcriptional regulator3825.0e-107
scabSCAB16001 putative AraC-family transcriptional regulator4055.0e-114
saceSACE_7337 AraC-family transcriptional regulator4031.0e-113

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain252-33078.23.8e-22

DJ-1_PfpI1DJ-1/PfpI family25-19161.76.6e-17

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family243-28060.11.3e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU44936.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 14370.0e+00
WP_003973583.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14370.0e+00
WP_213089171.1 helix-turn-helix domain-containing protein [Streptomyces ant... 14370.0e+00
WP_161270205.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14360.0e+00
WP_191849259.1 helix-turn-helix domain-containing protein [Streptomyces ant... 14360.0e+00
WP_037897627.1 helix-turn-helix domain-containing protein [Streptomyces vio... 14360.0e+00
WP_210983933.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14320.0e+00
WP_202977495.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14230.0e+00
WP_162833324.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14080.0e+00
AXL91035.1 AraC family transcriptional regulator [Streptomyces sp. CB09001] 14060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear