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IDSCO5428 TypeCDS
From2766814 nt length891
To2767704 aa length296
Gene pI10.69
Definitionputative integral membrane transport protein M.W (Da)32012
NoteSC6A11.04c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2820 putative multiple sugar ABC transporter permease protein4101.0e-115
samSAM23877_5172 Integral membrane transport protein4841.0e-175
scabSCAB28151 putative multiple sugar ABC transporter permease protein4345.0e-123
saceSACE_7277 ABC transporter, permease protein2716.0e-74

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component103-28461.48e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_109033486.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 11765.1e-161
WP_003973570.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11741.3e-160
WP_115744278.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 11731.6e-160
WP_161376777.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11713.1e-160
WP_102929964.1 carbohydrate ABC transporter permease [Streptomyces diastati... 11703.5e-160
WP_121709089.1 carbohydrate ABC transporter permease [Streptomyces sp. E5N9... 11714.3e-160
WP_153177872.1 carbohydrate ABC transporter permease [Streptomyces sp. SYP-... 11695.6e-160
WP_164383191.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 11696.2e-160
WP_212731213.1 ABC transporter permease subunit [Streptomyces sp. V17-9] >g... 11687.6e-160
WP_059301509.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11688.1e-160

PSORT result

LocalizationCertaintyPSORT said
Not Clear