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IDSCO5451 TypeCDS
From2730050 nt length1983
To2732032 aa length660
Gene pI5.79
Definitionputative ABC transporter M.W (Da)70006
NoteSC3D11.08c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2790 putative ABC transporter ATP-binding protein8270.0e+00
sgrSGR_2091 putative ABC transporter ATPase and permease component8500.0e+00
samSAM23877_5193 ABC transporter9680.0e+00
scabSCAB27881 putative ABC transporter ATP-binding protein9220.0e+00
nfarnfa21470 putative ABC transporter4072.0e-114

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region46-314136.51.2e-39

ABC_tran1ABC transporter426-574104.08e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030255.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 30300.0e+00
WP_136207576.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 30090.0e+00
WP_189284963.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 30070.0e+00
WP_193486970.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 30050.0e+00
WP_003973547.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 29450.0e+00
WP_210984970.1 ATP-binding cassette domain-containing protein [Streptomyces... 29450.0e+00
WP_106517754.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 29390.0e+00
WP_030870024.1 ABC transporter ATP-binding protein/permease [Streptomyces v... 29370.0e+00
WP_093457030.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 29230.0e+00
WP_153177853.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear