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IDSCO5494 TypeCDS
From2688723 nt length2208
To2686516 aa length735
GeneligA pI4.87
DefinitionSC8D9.06 putative DNA ligase M.W (Da)80540
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2748 putative DNA ligase11700.0e+00
sgrSGR_2021 putative DNA ligase11390.0e+00
samSAM23877_5244 DNA ligase 113570.0e+00
scabSCAB27251 putative DNA ligase12130.0e+00
saceSACE_6177 DNA ligase, NAD-dependent7800.0e+00
nfarnfa42650 putative DNA ligase7560.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_aden1NAD-dependent DNA ligase adenylation domain19-333416.55.6e-125

DNA_ligase_OB1NAD-dependent DNA ligase OB-fold domain337-41399.95.2e-29

HHH_21Helix-hairpin-helix motif561-62473.51e-20

BRCT1BRCA1 C Terminus (BRCT) domain645-71556.72.2e-15

DNA_ligase_ZBD1NAD-dependent DNA ligase C4 zinc finger domain422-45033.62.6e-08

PTCB-BRCT1twin BRCT domain652-71131.21.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030278.1 NAD-dependent DNA ligase LigA [Streptomyces coelicolor] >sp 37310.0e+00
WP_003973504.1 MULTISPECIES: NAD-dependent DNA ligase LigA [Streptomyces] >... 37290.0e+00
WP_202493684.1 MULTISPECIES: NAD-dependent DNA ligase LigA [Streptomyces] 37260.0e+00
WP_076976446.1 NAD-dependent DNA ligase LigA [Streptomyces sp. M1013] >gb 37080.0e+00
WP_121703853.1 NAD-dependent DNA ligase LigA [Streptomyces sp. E5N298] 37060.0e+00
WP_121713821.1 NAD-dependent DNA ligase LigA [Streptomyces sp. E5N91] 36970.0e+00
WP_210974413.1 NAD-dependent DNA ligase LigA [Streptomyces sp. RM72] >lcl 36940.0e+00
WP_104633346.1 NAD-dependent DNA ligase LigA [Streptomyces sp. MH60] >gb 36930.0e+00
WP_226028334.1 NAD-dependent DNA ligase LigA [Streptomyces hyderabadensis] 36850.0e+00
WP_059302290.1 NAD-dependent DNA ligase LigA [Streptomyces canus] 36840.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear