-- | --

IDSCO5518 TypeCDS
From2655544 nt length1248
To2656791 aa length415
Gene pI6.28
Definitionputative transcriptional regulator M.W (Da)43827
NoteSC8D9.30c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2725 putative transcriptional regulator5317.0e-152
sgrSGR_1990 putative transcriptional regulator4348.0e-123
samSAM23877_5268 putative transcriptional regulator6600.0e+00
scabSCAB27011 putative transcriptional regulator5484.0e-157

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain354-41281.91.9e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973478.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14590.0e+00
AIJ13177.1 transcriptional regulator [Streptomyces lividans TK24] >gb 14580.0e+00
WP_136207568.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14530.0e+00
WP_189285116.1 helix-turn-helix domain-containing protein [Streptomyces ant... 14520.0e+00
WP_193486945.1 helix-turn-helix domain-containing protein [Streptomyces ant... 14500.0e+00
PSK49070.1 Proline-responsive transcriptional activator PutR [Streptomyces s... 14490.0e+00
WP_030870098.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14490.0e+00
WP_093457052.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14410.0e+00
WP_109036183.1 helix-turn-helix domain-containing protein [Streptomyces rub... 14400.0e+00
WP_165684744.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14390.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear